Difference between revisions of "UKCA Release Jobs"

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(Created page with "This page contains documentation on UKCA standard jobs that have not yet been released, but will be soon. ==Getting Started== ===PUMA=== The UK Met Office's Unified Model (UM)…")
 
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* '''Model start date and run length''': <br/> Model Selection -> Input/Output Control and Resources -> Start Date and Run Length Options <br/> '''''NOTE:''' For Stratospheric Chemistry, the CFC and other long-lived trace gas concentrations will be highly dependent on year - you will need to think about your chemical tracer initial conditions if you change the start date of a Stratospheric Chemistry run.''
 
* '''Model start date and run length''': <br/> Model Selection -> Input/Output Control and Resources -> Start Date and Run Length Options <br/> '''''NOTE:''' For Stratospheric Chemistry, the CFC and other long-lived trace gas concentrations will be highly dependent on year - you will need to think about your chemical tracer initial conditions if you change the start date of a Stratospheric Chemistry run.''
* '''Archiving''': <br/> Model Selection -> Post Processing -> Main Switch + General Questions <br/> ''Currently archiving is switched '''ON'''.<br/> All model output will placed in a directory called '''archive''' which is a sub-directory of your run directory. Superseded model restart dumps will be deleted.''
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* '''Archiving''': <br/> Model Selection -> Post Processing -> Main Switch + General Questions <br/> ''Currently archiving is switched '''ON''' for most jobs.<br/> On HECToR all model output will placed in a directory called '''archive''' which is a sub-directory of your run directory.<br/> ON MONSooN, all data is copied to '''/nerc/PROJECT/USERID/JOBID'''.<br/> Superseded model restart dumps will be deleted.''
* '''UKCA Surface emissions''' (as ''user single-level ancillary file''): <br/> Model Selection -> Atmosphere -> Ancillary and input data files -> Climatologies and potential climatologies -> User single-level ancillary files and fields''
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* '''UKCA Surface Emissions''' (as ''user single-level ancillary file''): <br/> Model Selection -> Atmosphere -> Ancillary and input data files -> Climatologies and potential climatologies -> User single-level ancillary files and fields <br/> ''The emissions data-sets used are ones that have been used in previous studies, and represent the present day. You may wish to change these emissions - to do this we recommend the use of [http://ncas-cms.nerc.ac.uk//index.php?option=com_wrapper&Itemid=274 XAncil], provided by NCAS-CMS.''
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* '''UKCA 3D Emissions''' (as ''user multi-level ancillary file''): <br/> Model Selection -> Atmosphere -> Ancillary and input data files -> Climatologies and potential climatologies -> User single-level ancillary files and fields <br/> ''The standard aircraft emissions data-set comes from the Aero2K project, and represents the year 2000. You may wish to change these emissions - to do this we recommend the use of [http://ncas-cms.nerc.ac.uk//index.php?option=com_wrapper&Itemid=274 XAncil], provided by NCAS-CMS.''
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The settings in the UMUI UKCA panel have been chosen for that specific chemistry/aerosol scheme, and choosing other options may not work. If you wish for extra functionality, please contact [mailto:Luke.Abraham@atm.ch.cam.ac.uk Luke Abraham] to check on the current code status.
   
 
==Tropospheric Chemistry with Isoprene==
 
==Tropospheric Chemistry with Isoprene==

Revision as of 17:44, 3 February 2011

This page contains documentation on UKCA standard jobs that have not yet been released, but will be soon.

Getting Started

PUMA

The UK Met Office's Unified Model (UM) is provided for the NERC community from NCAS Computational Modelling Services via the PUMA (Providing UM Access) resource. To use UKCA you must have an account on PUMA. To obtain one, please go to the NCAS-CMS PUMA page.

FCM

The UM uses code management software, built around subversion, called FCM (Flexible Configuration Management). If you have not used the UM with FCM, we recommend first familiarising yourself with the system, by doing the UM FCM Tutorial. As well as being a good introduction to FCM and the UM User Interface (UMUI), it will also teach you how to set-up some configuration files that will be needed in the day-to-day running of the UM and UKCA.

Standard Release Jobs

UKCA can be configured through the UMUI, via it's own configuration panel. This mostly controls all the options required to run UKCA, although some extra changes have been made with hand-edits. To make it easy to get started with UKCA, several standard jobs have been created at various resolutions. To get started with UKCA, it should be a simple matter to take a copy of the UKCA job that you wish to run, changing a few user-specific options, and submitting the job.

Available release jobs are:

UM Version UMUI Job-ID Climate Model Horizontal Resolution Vertical Levels Model Top Scheme Used
7.3 QESM-A N48 (2.5°×3.75°) L60 ~84km Tropospheric Chemistry with Isoprene
7.3 HadGEM3-A r2.0 N96 (1.25°×1.875°) L63 ~40km Tropospheric Chemistry with Isoprene
7.3 QESM-A N48 L60 ~84km Stratospheric Chemistry
7.3 HadGEM3-A r2.0 N96 L85   85km Stratospheric Chemistry
7.3 QESM-A N48 L60 ~84km Simple Tropospheric Chemistry with MODE Aerosol
7.3 HadGEM3-A r2.0 N96 L38 ~40km Simple Tropospheric Chemistry with MODE Aerosol
7.3 HadGEM3-A r2.0 N96 L38 ~40km Simple Tropospheric Chemistry with MODE Aerosol (Nudged)

Required UMUI Changes

Before submitting a UKCA job, you must first alter several options in the UMUI:

  • User-id, Mail-id (email address), and Tic-Code:
    Model Selection -> User Information and Target Machine -> General Details
    The user-id is your username on the target machine (i.e. HECToR).
    The tic-code will be the HECToR charging code, e.g. n02-chem. This code can be found by logging into the HECToR SAFE pages, and viewing your account information.
  • Target machine root extract directory (UM_ROUTDIR):
    Model Selection -> FCM Configuration -> FCM Extract and Build directories and Output levels
    This needs to be the full path to your working directory on the target machine (i.e. HECToR).

Optional UMUI Changes

  • Model start date and run length:
    Model Selection -> Input/Output Control and Resources -> Start Date and Run Length Options
    NOTE: For Stratospheric Chemistry, the CFC and other long-lived trace gas concentrations will be highly dependent on year - you will need to think about your chemical tracer initial conditions if you change the start date of a Stratospheric Chemistry run.
  • Archiving:
    Model Selection -> Post Processing -> Main Switch + General Questions
    Currently archiving is switched ON for most jobs.
    On HECToR all model output will placed in a directory called archive which is a sub-directory of your run directory.
    ON MONSooN, all data is copied to /nerc/PROJECT/USERID/JOBID.
    Superseded model restart dumps will be deleted.
  • UKCA Surface Emissions (as user single-level ancillary file):
    Model Selection -> Atmosphere -> Ancillary and input data files -> Climatologies and potential climatologies -> User single-level ancillary files and fields
    The emissions data-sets used are ones that have been used in previous studies, and represent the present day. You may wish to change these emissions - to do this we recommend the use of XAncil, provided by NCAS-CMS.
  • UKCA 3D Emissions (as user multi-level ancillary file):
    Model Selection -> Atmosphere -> Ancillary and input data files -> Climatologies and potential climatologies -> User single-level ancillary files and fields
    The standard aircraft emissions data-set comes from the Aero2K project, and represents the year 2000. You may wish to change these emissions - to do this we recommend the use of XAncil, provided by NCAS-CMS.

The settings in the UMUI UKCA panel have been chosen for that specific chemistry/aerosol scheme, and choosing other options may not work. If you wish for extra functionality, please contact Luke Abraham to check on the current code status.

Tropospheric Chemistry with Isoprene

Stratospheric Chemistry

Useful Links